recipe fanc

Framework for the ANalysis of C-data.

Homepage:

https://github.com/vaquerizaslab/fanc

Documentation:

https://vaquerizaslab.github.io/fanc

License:

ACADEMIC PUBLIC LICENSE (FAN-C)

Recipe:

/fanc/meta.yaml

package fanc

Versions:

0.9.23b-2,  0.9.0-1,  0.9.0-0

Depends:

• biopython

• cooler >=0.8.0

• future

• genomic_regions >=0.0.7

• gridmap >=0.14.0

• h5py

• intervaltree

• libgcc-ng >=10.3.0

• matplotlib-base

• msgpack-numpy >=0.4.4.3

• msgpack-python

• numpy >=1.16.0

• pandas >=0.15.0

• pillow

• progressbar2

• pybedtools

• pybigwig

• pysam >=0.9.1

• pytables >=3.5.1

• python >=3.7,<3.8.0a0

• python_abi 3.7.* *_cp37m

• pyyaml >=5.1

• scikit-image >=0.15.0

• scikit-learn

• scipy

• seaborn

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install fanc

and update with:

conda update fanc

or use the docker container:

docker pull quay.io/biocontainers/fanc:<tag>

(see fanc/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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