recipe fgbio

A set of tools for working with genomic and high throughput sequencing data, including UMIs

Homepage

https://github.com/fulcrumgenomics/fgbio

License

MIT

Recipe

/fgbio/meta.yaml

package fgbio

(downloads) docker_fgbio

Versions

0.8.1-1, 0.8.1-0, 0.8.0-0, 0.7.0-0, 0.6.1-1, 0.6.1-0, 0.5.0a-0, 0.4.0-1, 0.4.0-0, 0.2.1b-0, 0.2.1a-0, 0.2.0-0, 0.1.5a-0, 0.1.3a-0, 0.1.2a-0

Depends openjdk

>=8

Depends python

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fgbio

and update with:

conda update fgbio

or use the docker container:

docker pull quay.io/biocontainers/fgbio:<tag>

(see fgbio/tags for valid values for <tag>)