ITSx is an open source software utility to extract the highly variable ITS1 and ITS2 subregions from ITS sequences, which is commonly used as a molecular barcode for e.g. fungi.
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install itsx
and update with:
conda update itsx
or use the docker container:
docker pull quay.io/biocontainers/itsx:<tag>
(see itsx/tags for valid values for