megahit

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MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

Home https://github.com/voutcn/megahit
Versions 1.0.3, 1.0.6, 1.1.1
License GPL3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/megahit

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install megahit

and update with:

conda update megahit

docker

A Docker container is available at https://quay.io/repository/biocontainers/megahit.