recipe msisensor-pro

Microsatellite Instability (MSI) detection using high-throughput sequencing data.

Homepage:

https://github.com/xjtu-omics/msisensor-pro

License:

Custom Licence

Recipe:

/msisensor-pro/meta.yaml

package msisensor-pro

Versions:

1.2.0-4,  1.2.0-3,  1.2.0-2,  1.2.0-1,  1.2.0-0,  1.1.a-1,  1.1.a-0,  1.0.a-8,  1.0.a-7, 

1.2.0-4,  1.2.0-3,  1.2.0-2,  1.2.0-1,  1.2.0-0,  1.1.a-1,  1.1.a-0,  1.0.a-8,  1.0.a-7,  1.0.a-3,  1.0.a-2,  1.0.a-1,  1.0.a-0,  0.1.1-9,  0.1.1-8,  0.1.1-7,  0.1.1-6,  0.1.1-5,  0.1.1-0,  0.0.1-0,  v1.2.0-0

Depends:

• _openmp_mutex >=4.5

• htslib >=1.16,<1.17.0a0

• libgcc-ng >=12

• libstdcxx-ng >=12

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install msisensor-pro

and update with:

conda update msisensor-pro

or use the docker container:

docker pull quay.io/biocontainers/msisensor-pro:<tag>

(see msisensor-pro/tags for valid values for <tag>)

Download stats

Link to this page

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