recipe pbbam

PacBio BAM C++ library

Homepage

https://github.com/PacificBiosciences/pbbam

License

BSD-3-Clause-Clear

Recipe

/pbbam/meta.yaml

package pbbam

Versions

1.0.6-1, 1.0.6-0, 0.23.0-0, 0.19.0-1, 0.19.0-0, 0.18.0-4, 0.18.0-1, 0.18.0-0, 0.1-2, 0.1-1, 0.1-0

Depends

• htslib >=1.9,<1.10.0a0

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• pbcopper 1.3.0.*

• zlib >=1.2.11,<1.3.0a0

Required By

• pbalign

• pbmm2

• blasr

• bax2bam

• bam2fastx

• blasr_libcpp

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pbbam

and update with:

conda update pbbam

or use the docker container:

docker pull quay.io/biocontainers/pbbam:<tag>

(see pbbam/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pbbam/README.html)