recipe perl-bioperl

Bioinformatics Toolkit

Homepage

http://metacpan.org/pod/BioPerl

License

perl_5

Recipe

/perl-bioperl/meta.yaml

Links

biotools: bioperl, doi: 10.1007/978-1-59745-535-0_26

package perl-bioperl

(downloads) docker_perl-bioperl

Versions

1.7.2-10, 1.7.2-9, 1.7.2-8, 1.6.924-7, 1.6.924-6, 1.6.924-5, 1.6.924-4, 1.6.924-3, 1.6.924-2, 1.6.924-1, 1.6.924-0

Depends perl

>=5.26.2,<5.26.3.0a0

Depends perl-bio-asn1-entrezgene

Depends perl-bio-coordinate

Depends perl-bio-featureio

Depends perl-bio-samtools

Depends perl-bio-tools-phylo-paml

Depends perl-bio-tools-run-alignment-clustalw

Depends perl-bio-tools-run-alignment-tcoffee

Depends perl-bioperl-core

1.007002

Depends perl-bioperl-run

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install perl-bioperl

and update with:

conda update perl-bioperl

or use the docker container:

docker pull quay.io/biocontainers/perl-bioperl:<tag>

(see perl-bioperl/tags for valid values for <tag>)