recipe r-shinyngs

Provides Shiny applications for various array and NGS applications. Currently very RNA-seq centric, with plans for expansion.

Homepage:

https://github.com/pinin4fjords/shinyngs

License:

AGPL / AGPL-3.0

Recipe:

/r-shinyngs/meta.yaml

package r-shinyngs

Versions:

1.7.2-1,  1.7.2-0,  1.7.1-1,  1.7.1-0,  1.6.1-0,  1.6.0-1,  1.6.0-0,  1.5.9-0,  1.5.8-0, 

1.7.2-1,  1.7.2-0,  1.7.1-1,  1.7.1-0,  1.6.1-0,  1.6.0-1,  1.6.0-0,  1.5.9-0,  1.5.8-0,  1.5.6-1,  1.5.6-0,  1.5.5-0,  1.5.4-0,  1.5.3-0,  1.5.1-0,  1.5.0-0,  1.4.2-3,  1.4.2-2,  1.4.2-1,  1.4.2-0,  1.4.1-0,  1.4.0-0,  1.3.2-0,  1.3.0-1,  1.3.0-0,  1.2.0-0,  1.1.0-0,  1.0.1-0,  1.0.0-0

Depends:

• bioconductor-gseabase

• bioconductor-limma

• bioconductor-summarizedexperiment

• pandoc <2.19

• r-base >=4.2,<4.3.0a0

• r-base64enc

• r-biocmanager

• r-cluster

• r-cpp11

• r-data.table

• r-dendextend >=0.18.0

• r-dplyr

• r-dt >=0.2

• r-ggdendro

• r-ggplot2

• r-htmlwidgets

• r-markdown

• r-optparse

• r-pheatmap

• r-plotly >=4.3.4

• r-plyr

• r-png

• r-rcolorbrewer

• r-reshape2

• r-rmarkdown

• r-rsconnect

• r-scales >=0.2.5

• r-scatterplot3d

• r-shiny

• r-shinybs

• r-shinyjs

• r-shinythemes

• r-stringi >=1.7.12

• r-yaml

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-shinyngs

and update with:

conda update r-shinyngs

or use the docker container:

docker pull quay.io/biocontainers/r-shinyngs:<tag>

(see r-shinyngs/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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