shorah

downloads

The Short Reads Assembly into Haplotypes (ShoRAH) program for inferring viral haplotypes from NGS data

Home https://github.com/cbg-ethz/shorah
Versions 1.0.0, 1.1.0
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/shorah/1.0.0

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install shorah

and update with:

conda update shorah

docker

A Docker container is available at https://quay.io/repository/biocontainers/shorah.