soapdenovo-trans

downloads

SOAPdenovo-Trans is a de novo transcriptome assembler basing on the SOAPdenovo framework, adapt to alternative splicing and different expression level among transcripts.

Home http://soap.genomics.org.cn/SOAPdenovo-Trans.html
Versions 1.04
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/soapdenovo-trans

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install soapdenovo-trans

and update with:

conda update soapdenovo-trans

docker

A Docker container is available at https://quay.io/repository/biocontainers/soapdenovo-trans.