- recipe trtools
Toolkit for genome-wide analysis of tandem repeats https://trtools.readthedocs.io/
- Homepage:
- Documentation:
- Developer docs:
- License:
MIT / MIT
- Recipe:
- package trtools¶
-
- Versions:
4.1.0-0
,4.0.2-0
,4.0.1-0
,4.0.0-2
,4.0.0-1
,4.0.0-0
,3.0.3-0
,3.0.2-0
,2.0.18-1
,4.1.0-0
,4.0.2-0
,4.0.1-0
,4.0.0-2
,4.0.0-1
,4.0.0-0
,3.0.3-0
,3.0.2-0
,2.0.18-1
,2.0.18-0
- Depends:
cyvcf2
>=0.30.1
matplotlib-base
>=3.2.2
numpy
>=1.18.5
pandas
>=1.0.5
pybedtools
>=0.8.1
pysam
>=0.16.0.1
python
>=3.5
scikit-learn
>=0.23.1
scipy
>=1.4.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install trtools
and update with:
conda update trtools
or use the docker container:
docker pull quay.io/biocontainers/trtools:<tag>
(see trtools/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/trtools/README.html)