- recipe abricate
Mass screening of contigs for antibiotic resistance genes
- Homepage:
- License:
GPL-2.0-only
- Recipe:
- Links:
- package abricate¶
-
- Versions:
1.0.1-1
,1.0.1-0
,1.0.0-0
,0.9.9-0
,0.9.8-0
,0.9.7-0
,0.9.3-0
,0.8.13-0
,0.8.10-0
,1.0.1-1
,1.0.1-0
,1.0.0-0
,0.9.9-0
,0.9.8-0
,0.9.7-0
,0.9.3-0
,0.8.13-0
,0.8.10-0
,0.8.7-0
,0.8-1
,0.8-0
,0.7-2
,0.7-1
,0.7-0
,0.5-2
,0.5-1
,0.5-0
,0.4-2
,0.4-1
,0.4-0
,0.3-0
,0.2-1
,0.2-0
- Depends:
blast
>=2.7
perl-bioperl
>=1.7
zlib
>=1.2.11,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install abricate
and update with:
conda update abricate
or use the docker container:
docker pull quay.io/biocontainers/abricate:<tag>
(see abricate/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/abricate/README.html)