recipe astalavista

AStalavista is a computer program to extract alternative splicing (AS) events from a given genomic annotation of exon-intron gene coordinates. By comparing all given transcripts, AStalavista detects the variations in their splicing structure and identify all AS events (like exon skipping, alternate donor, etc) by assigning to each of them an AS code.

Homepage:

http://sammeth.net/confluence/display/ASTA/Home

License:

BSD

Recipe:

/astalavista/meta.yaml

Links:

biotools: astalavista, doi: 10.1101/gr.121947.111

package astalavista

(downloads) docker_astalavista

Versions:

4.0-14.0-03.2-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install astalavista

and update with:

conda update astalavista

or use the docker container:

docker pull quay.io/biocontainers/astalavista:<tag>

(see astalavista/tags for valid values for <tag>)

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