recipe barrnap-python

python package for Torsten Seemann's barrnap package for annotating rRNAs

Homepage:

https://github.com/nickp60/barrnap-python

License:

GPL3 / GNU General Public License v3.0

Recipe:

/barrnap-python/meta.yaml

Original Perl code can be found at the projects homepage here: https://github.com/tseemann/barrnap

package barrnap-python

versions:

0.0.5-2,  0.0.5-1,  0.0.5-0

depends barrnap:

>=0.8

depends python:

>=3

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install barrnap-python

and update with::

   mamba update barrnap-python

To create a new environment, run:

mamba create --name myenvname barrnap-python

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/barrnap-python:<tag>

(see `barrnap-python/tags`_ for valid values for ``<tag>``)

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