recipe bcalm

BCALM 2 is a bioinformatics tool for constructing the compacted de Bruijn graph from sequencing data.

Homepage:

https://github.com/GATB/bcalm

License:

MIT License

Recipe:

/bcalm/meta.yaml

package bcalm

Versions:

2.2.3-5,  2.2.3-4,  2.2.3-3,  2.2.3-2,  2.2.3-1,  2.2.3-0,  2.2.2-1,  2.2.2-0,  2.2.1-3, 

2.2.3-5,  2.2.3-4,  2.2.3-3,  2.2.3-2,  2.2.3-1,  2.2.3-0,  2.2.2-1,  2.2.2-0,  2.2.1-3,  2.2.1-2,  2.2.1-1,  2.2.1-0,  2.2.0-3,  2.2.0-2,  2.2.0-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• zlib

Required By:

• bwise

• bcool

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bcalm

and update with:

conda update bcalm

or use the docker container:

docker pull quay.io/biocontainers/bcalm:<tag>

(see bcalm/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bcalm/README.html)