-
recipe
bio_hansel
Subtype Salmonella enterica genomes using 33bp k-mer typing schemes.
- Homepage
- License
GPL3 / GNU General Public License v3 or later (GPLv3+)
- Recipe
'Subtype Salmonella enterica genomes using 33bp k-mer typing schemes. ' 'Includes schemes for Heidelberg and Enteritidis subtyping.'
-
package
bio_hansel
¶ -
- Versions
2.4.0-0
,2.2.0-1
,2.2.0-0
,2.1.1-0
,2.1.0-0
,2.0.0-1
,2.0.0-0
,1.3.2-0
,1.3.1-0
,2.4.0-0
,2.2.0-1
,2.2.0-0
,2.1.1-0
,2.1.0-0
,2.0.0-1
,2.0.0-0
,1.3.2-0
,1.3.1-0
,1.3.0-0
,1.2.0-0
,1.1.3-0
,1.1.1-0
,1.1.0-0
,0.2.0-1
,0.1.0-0
- Depends
numpy
>=1.12.1
pandas
>=0.20.1
pyahocorasick
>=1.1.6
python
>=3
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bio_hansel
and update with:
conda update bio_hansel
or use the docker container:
docker pull quay.io/biocontainers/bio_hansel:<tag>
(see bio_hansel/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bio_hansel/README.html)