-
recipe
bioconductor-affycoretools
¶ Functions useful for those doing repetitive analyses with Affymetrix GeneChips
- Homepage
https://bioconductor.org/packages/3.10/bioc/html/affycoretools.html
- License
Artistic-2.0
- Recipe
- Links
biotools: affycoretools, doi: 10.1038/nmeth.3252
Various wrapper functions that have been written to streamline the more common analyses that a core Biostatistician might see.
-
package
bioconductor-affycoretools
¶ -
- Versions
1.58.0-0, 1.56.0-1, 1.54.0-0, 1.52.2-0, 1.50.6-0
- Depends
bioconductor-affy >=1.64.0,<1.65.0
bioconductor-annotationdbi >=1.48.0,<1.49.0
bioconductor-biobase >=2.46.0,<2.47.0
bioconductor-biocgenerics >=0.32.0,<0.33.0
bioconductor-edger >=3.28.0,<3.29.0
bioconductor-gcrma >=2.58.0,<2.59.0
bioconductor-gostats >=2.52.0,<2.53.0
bioconductor-limma >=3.42.0,<3.43.0
bioconductor-oligoclasses >=1.48.0,<1.49.0
bioconductor-reportingtools >=2.26.0,<2.27.0
bioconductor-s4vectors >=0.24.0,<0.25.0
r-base >=3.6,<3.7.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-affycoretools
and update with:
conda update bioconductor-affycoretools
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-affycoretools:<tag>
(see bioconductor-affycoretools/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-affycoretools/README.html)