- recipe bioconductor-affycoretools
Functions useful for those doing repetitive analyses with Affymetrix GeneChips
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/affycoretools.html
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: affycoretools, doi: 10.1038/nmeth.3252
Various wrapper functions that have been written to streamline the more common analyses that a core Biostatistician might see.
- package bioconductor-affycoretools¶
-
- Versions:
1.70.0-0
,1.66.0-0
,1.64.0-0
,1.62.0-1
,1.62.0-0
,1.60.1-0
,1.58.0-0
,1.56.0-1
,1.54.0-0
,1.70.0-0
,1.66.0-0
,1.64.0-0
,1.62.0-1
,1.62.0-0
,1.60.1-0
,1.58.0-0
,1.56.0-1
,1.54.0-0
,1.52.2-0
,1.50.6-0
- Depends:
bioconductor-affy
>=1.76.0,<1.77.0
bioconductor-annotationdbi
>=1.60.0,<1.61.0
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-edger
>=3.40.0,<3.41.0
bioconductor-gcrma
>=2.70.0,<2.71.0
bioconductor-glimma
>=2.8.0,<2.9.0
bioconductor-gostats
>=2.64.0,<2.65.0
bioconductor-limma
>=3.54.0,<3.55.0
bioconductor-oligoclasses
>=1.60.0,<1.61.0
bioconductor-reportingtools
>=2.38.0,<2.39.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-affycoretools
and update with:
conda update bioconductor-affycoretools
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-affycoretools:<tag>
(see bioconductor-affycoretools/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-affycoretools/README.html)