Package Recipe 'bioconductor-ahlrbasedbs'

recipe bioconductor-ahlrbasedbs

LRBaseDbs for AnnotationHub

Homepage:: https://bioconductor.org/packages/3.16/data/annotation/html/AHLRBaseDbs.html
License:: Artistic-2.0
Recipe:: /bioconductor-ahlrbasedbs/meta.yaml

Supplies AnnotationHub with `LRbaseDb` Ligand-Receptor annotation databases for many species. All the SQLite files are generated by our Snakemake workflow [lrbase-workflow](https://github.com/rikenbit/lrbase-workflow). For the details, see the README.md of lrbase-workflow.

package bioconductor-ahlrbasedbs¶

Versions:

1.5.0-0, 1.2.0-1, 1.2.0-0, 0.99.3-0

Depends:

bioconductor-annotationhub >=3.6.0,<3.7.0
bioconductor-data-packages >=20221102
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-ahlrbasedbs

and update with:

conda update bioconductor-ahlrbasedbs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ahlrbasedbs:<tag>

(see bioconductor-ahlrbasedbs/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ahlrbasedbs/README.html)