-
recipe
bioconductor-attract¶ This package contains the functions to find the gene expression modules that represent the drivers of Kauffman’s attractor landscape. The modules are the core attractor pathways that discriminate between different cell types of groups of interest. Each pathway has a set of synexpression groups, which show transcriptionally-coordinated changes in gene expression.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/attract.html
- License
LGPL (>= 2.0)
- Recipe
-
package
bioconductor-attract¶ 
- Versions
1.34.0-0
- Depends bioconductor-annotationdbi
>=1.44.0,<1.45.0
- Depends bioconductor-biobase
>=2.42.0,<2.43.0
- Depends bioconductor-gostats
>=2.48.0,<2.49.0
- Depends bioconductor-keggrest
>=1.22.0,<1.23.0
- Depends bioconductor-limma
>=3.38.0,<3.39.0
- Depends bioconductor-org.hs.eg.db
>=3.7.0,<3.8.0
- Depends bioconductor-reactome.db
>=1.66.0,<1.67.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-cluster
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-attract
and update with:
conda update bioconductor-attract
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-attract:<tag>
(see bioconductor-attract/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-attract/README.html)