recipe bioconductor-ballgown

Flexible, isoform-level differential expression analysis

Homepage

https://bioconductor.org/packages/3.11/bioc/html/ballgown.html

License

Artistic-2.0

Recipe

/bioconductor-ballgown/meta.yaml

Links

biotools: ballgown, doi: 10.1038/nbt.3172

Tools for statistical analysis of assembled transcriptomes, including flexible differential expression analysis, visualization of transcript structures, and matching of assembled transcripts to annotation.

package bioconductor-ballgown

(downloads) docker_bioconductor-ballgown

Versions

2.20.0-02.18.0-02.16.0-12.14.0-02.12.0-02.10.0-02.8.4-02.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ballgown

and update with:

conda update bioconductor-ballgown

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ballgown:<tag>

(see bioconductor-ballgown/tags for valid values for <tag>)