- recipe bioconductor-beadarray
Quality assessment and low-level analysis for Illumina BeadArray data
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/beadarray.html
- License
MIT + file LICENSE
- Recipe
- Links
biotools: beadarray
The package is able to read bead-level data (raw TIFFs and text files) output by BeadScan as well as bead-summary data from BeadStudio. Methods for quality assessment and low-level analysis are provided.
- package bioconductor-beadarray¶
-
- Versions
2.44.0-1
,2.44.0-0
,2.42.0-0
,2.40.0-1
,2.40.0-0
,2.38.0-0
,2.36.0-0
,2.34.0-1
,2.32.0-0
,2.44.0-1
,2.44.0-0
,2.42.0-0
,2.40.0-1
,2.40.0-0
,2.38.0-0
,2.36.0-0
,2.34.0-1
,2.32.0-0
,2.30.0-0
,2.28.0-0
,2.26.1-0
- Depends
bioconductor-annotationdbi
>=1.56.0,<1.57.0
bioconductor-beaddatapackr
>=1.46.0,<1.47.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-genomicranges
>=1.46.0,<1.47.0
bioconductor-illuminaio
>=0.36.0,<0.37.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-limma
>=3.50.0,<3.51.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-beadarray
and update with:
conda update bioconductor-beadarray
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-beadarray:<tag>
(see bioconductor-beadarray/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-beadarray/README.html)