recipe bioconductor-bearscc

BEARscc is a noise estimation and injection tool that is designed to assess putative single-cell RNA-seq clusters in the context of experimental noise estimated by ERCC spike-in controls.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/BEARscc.html

License

GPL-3

Recipe

/bioconductor-bearscc/meta.yaml

package bioconductor-bearscc

(downloads) docker_bioconductor-bearscc

Versions

1.2.0-0

Depends bioconductor-singlecellexperiment

>=1.4.0,<1.5.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-data.table

Depends r-ggplot2

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bearscc

and update with:

conda update bioconductor-bearscc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bearscc:<tag>

(see bioconductor-bearscc/tags for valid values for <tag>)