- recipe bioconductor-bioconcotk
Bioconductor components for general cancer genomics
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/BiocOncoTK.html
- License:
Artistic-2.0
- Recipe:
Provide a central interface to various tools for genome-scale analysis of cancer studies.
- package bioconductor-bioconcotk¶
-
- Versions:
1.18.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.4.0-1
,1.2.0-0
- Depends:
bioconductor-complexheatmap
>=2.14.0,<2.15.0
bioconductor-curatedtcgadata
>=1.20.0,<1.21.0
bioconductor-genomicfeatures
>=1.50.0,<1.51.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-graph
>=1.76.0,<1.77.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-rgraphviz
>=2.42.0,<2.43.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-bioconcotk
and update with:
conda update bioconductor-bioconcotk
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-bioconcotk:<tag>
(see bioconductor-bioconcotk/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-bioconcotk/README.html)