- recipe bioconductor-brainflowprobes
Plots and annotation for choosing BrainFlow target probe sequence
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/brainflowprobes.html
- License:
Artistic-2.0
- Recipe:
Use these functions to characterize genomic regions for BrainFlow target probe design.
- package bioconductor-brainflowprobes¶
-
- Versions:
1.12.0-0
,1.8.0-0
,1.6.0-0
,1.4.1-0
,1.4.0-0
,1.2.0-0
- Depends:
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-bsgenome.hsapiens.ucsc.hg19
>=1.4.0,<1.5.0
bioconductor-bumphunter
>=1.40.0,<1.41.0
bioconductor-derfinder
>=1.32.0,<1.33.0
bioconductor-derfinderplot
>=1.32.0,<1.33.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-genomicstate
>=0.99.0,<0.100.0
r-base
>=4.2,<4.3.0a0
r-cowplot
>=1.0.0
r-ggplot2
>=3.1.1
r-rcolorbrewer
>=1.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-brainflowprobes
and update with:
conda update bioconductor-brainflowprobes
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-brainflowprobes:<tag>
(see bioconductor-brainflowprobes/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-brainflowprobes/README.html)