recipe bioconductor-cager

Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining

Homepage

https://bioconductor.org/packages/3.11/bioc/html/CAGEr.html

License

GPL-3

Recipe

/bioconductor-cager/meta.yaml

Links

biotools: cager

Preprocessing of CAGE sequencing data, identification and normalization of transcription start sites and downstream analysis of transcription start sites clusters (promoters).

package bioconductor-cager

(downloads) docker_bioconductor-cager

Versions

1.30.0-01.28.0-01.26.0-11.24.0-01.22.3-01.20.0-01.18.1-01.16.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cager

and update with:

conda update bioconductor-cager

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cager:<tag>

(see bioconductor-cager/tags for valid values for <tag>)