recipe bioconductor-cbioportaldata

Exposes and makes available data from the cBioPortal web resources

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/cBioPortalData.html

License:

AGPL-3

Recipe:

/bioconductor-cbioportaldata/meta.yaml

The cBioPortalData R package accesses study datasets from the cBio Cancer Genomics Portal. It accesses the data either from the pre-packaged zip / tar files or from the API interface that was recently implemented by the cBioPortal Data Team. The package can provide data in either tabular format or with MultiAssayExperiment object that uses familiar Bioconductor data representations.

package bioconductor-cbioportaldata

(downloads) docker_bioconductor-cbioportaldata

Versions:

2.10.0-02.6.0-02.4.0-02.2.8-02.2.3-02.0.3-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-cbioportaldata

and update with:

conda update bioconductor-cbioportaldata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cbioportaldata:<tag>

(see bioconductor-cbioportaldata/tags for valid values for <tag>)

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