recipe bioconductor-cellid

Unbiased Extraction of Single Cell gene signatures using Multiple Correspondence Analysis

Homepage

https://bioconductor.org/packages/3.13/bioc/html/CelliD.html

License

GPL-3 + file LICENSE

Recipe

/bioconductor-cellid/meta.yaml

CelliD is a clustering-free multivariate statistical method for the robust extraction of per-cell gene signatures from single-cell RNA-seq. CelliD allows unbiased cell identity recognition across different donors, tissues-of-origin, model organisms and single-cell omics protocols. The package can also be used to explore functional pathways enrichment in single cell data.

package bioconductor-cellid

(downloads) docker_bioconductor-cellid

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cellid

and update with:

conda update bioconductor-cellid

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cellid:<tag>

(see bioconductor-cellid/tags for valid values for <tag>)