recipe bioconductor-cellnoptr

Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/CellNOptR.html

License:

GPL-3

Recipe:

/bioconductor-cellnoptr/meta.yaml

Links:

biotools: cellnoptr, doi: 10.1186/1752-0509-6-133

This package does optimisation of boolean logic networks of signalling pathways based on a previous knowledge network and a set of data upon perturbation of the nodes in the network.

package bioconductor-cellnoptr

(downloads) docker_bioconductor-cellnoptr

Versions:
1.40.0-11.40.0-01.38.0-01.36.0-11.36.0-01.34.0-01.32.0-01.30.0-11.28.0-0

1.40.0-11.40.0-01.38.0-01.36.0-11.36.0-01.34.0-01.32.0-01.30.0-11.28.0-01.26.0-01.24.1-01.23.0-01.22.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-cellnoptr

and update with:

conda update bioconductor-cellnoptr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cellnoptr:<tag>

(see bioconductor-cellnoptr/tags for valid values for <tag>)

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