recipe bioconductor-chipanalyser

ChIPanalyser: Predicting Transcription Factor Binding Sites

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ChIPanalyser.html

License:

GPL-3

Recipe:

/bioconductor-chipanalyser/meta.yaml

ChIPanalyser is a package to predict and understand TF binding by utilizing a statistical thermodynamic model. The model incorporates 4 main factors thought to drive TF binding: Chromatin State, Binding energy, Number of bound molecules and a scaling factor modulating TF binding affinity. Taken together, ChIPanalyser produces ChIP-like profiles that closely mimic the patterns seens in real ChIP-seq data.

package bioconductor-chipanalyser

(downloads) docker_bioconductor-chipanalyser

Versions:

1.20.0-01.16.0-01.14.0-01.12.0-11.12.0-01.10.0-01.8.0-01.6.0-11.4.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-chipanalyser

and update with:

conda update bioconductor-chipanalyser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chipanalyser:<tag>

(see bioconductor-chipanalyser/tags for valid values for <tag>)

Download stats