recipe bioconductor-chipxpressdata

ChIPXpress Pre-built Databases

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/ChIPXpressData.html

License:

GPL (>=2)

Recipe:

/bioconductor-chipxpressdata/meta.yaml

Contains pre-built mouse (GPL1261) and human (GPL570) database of gene expression profiles to be used for ChIPXpress ranking.

package bioconductor-chipxpressdata

Versions:

1.36.0-0,  1.35.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-0,  1.24.0-0,  1.22.0-1,  1.22.0-0, 

1.36.0-0,  1.35.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-0,  1.24.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-0,  1.16.0-0

Depends:

• bioconductor-data-packages >=20221106

• curl

• r-base >=4.2,<4.3.0a0

• r-bigmemory

Required By:

• bioconductor-chipxpress

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-chipxpressdata

and update with:

conda update bioconductor-chipxpressdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chipxpressdata:<tag>

(see bioconductor-chipxpressdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-chipxpressdata/README.html)