bioconductor-chromdraw

downloads

ChromDraw is a R package for drawing the schemes of karyotype(s) in the linear and circular fashion. It is possible to visualized cytogenetic marsk on the chromosomes. This tool has own input data format. Input data can be imported from the GenomicRanges data structure. This package can visualized the data in the BED file format. Here is requirement on to the first nine fields of the BED format. Output files format are *.eps and *.svg.

Home http://bioconductor.org/packages/3.6/bioc/html/chromDraw.html
Versions 2.6.0, 2.8.0
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-chromdraw

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-chromdraw

and update with:

conda update bioconductor-chromdraw

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-chromdraw.