Package Recipe 'bioconductor-chromhmmdata'

recipe bioconductor-chromhmmdata

Chromosome Size, Coordinates and Anchor Files

Homepage:: https://bioconductor.org/packages/3.16/data/annotation/html/chromhmmData.html
License:: GPL-3
Recipe:: /bioconductor-chromhmmdata/meta.yaml

Annotation files of the formatted genomic annotation for ChromHMM. Three types of text files are included the chromosome sizes, region coordinates and anchors specifying the transcription start and end sites. The package includes data for two versions of the genome of humans and mice.

package bioconductor-chromhmmdata¶

Versions:

0.99.2-2, 0.99.2-1, 0.99.2-0

Depends:

bioconductor-data-packages >=20221102
curl
r-base >=4.2,<4.3.0a0

Required By:

bioconductor-segmenter

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-chromhmmdata

and update with:

conda update bioconductor-chromhmmdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chromhmmdata:<tag>

(see bioconductor-chromhmmdata/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-chromhmmdata/README.html)