recipe bioconductor-chromstar

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/chromstaR.html

License:

Artistic-2.0

Recipe:

/bioconductor-chromstar/meta.yaml

Links:

biotools: chromstar, doi: 10.1101/038612

This package implements functions for combinatorial and differential analysis of ChIP-seq data. It includes uni- and multivariate peak-calling, export to genome browser viewable files, and functions for enrichment analyses.

package bioconductor-chromstar

(downloads) docker_bioconductor-chromstar

Versions:
1.24.0-01.20.2-11.20.2-01.19.0-01.18.0-01.16.0-21.16.0-11.16.0-01.14.1-0

1.24.0-01.20.2-11.20.2-01.19.0-01.18.0-01.16.0-21.16.0-11.16.0-01.14.1-01.12.0-11.10.0-11.8.1-01.8.0-01.6.2-01.4.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-chromstar

and update with:

conda update bioconductor-chromstar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chromstar:<tag>

(see bioconductor-chromstar/tags for valid values for <tag>)

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