recipe bioconductor-chromswitch

An R package to detect chromatin state switches from epigenomic data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/chromswitch.html

License

MIT + file LICENSE

Recipe

/bioconductor-chromswitch/meta.yaml

Chromswitch implements a flexible method to detect chromatin state switches between samples in two biological conditions in a specific genomic region of interest given peaks or chromatin state calls from ChIP-seq data.

package bioconductor-chromswitch

(downloads) docker_bioconductor-chromswitch

Versions

1.10.0-01.8.0-01.6.0-11.4.1-01.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-chromswitch

and update with:

conda update bioconductor-chromswitch

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chromswitch:<tag>

(see bioconductor-chromswitch/tags for valid values for <tag>)