recipe bioconductor-citefuse

CiteFuse: multi-modal analysis of CITE-seq data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/CiteFuse.html

License

GPL-3

Recipe

/bioconductor-citefuse/meta.yaml

CiteFuse pacakage implements a suite of methods and tools for CITE-seq data from pre-processing to integrative analytics, including doublet detection, network-based modality integration, cell type clustering, differential RNA and protein expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive web-based visualisation of the analyses.

package bioconductor-citefuse

(downloads) docker_bioconductor-citefuse

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-citefuse

and update with:

conda update bioconductor-citefuse

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-citefuse:<tag>

(see bioconductor-citefuse/tags for valid values for <tag>)