recipe bioconductor-cnviz

Copy Number Visualization

Homepage

https://bioconductor.org/packages/3.13/bioc/html/CNViz.html

License

Artistic-2.0

Recipe

/bioconductor-cnviz/meta.yaml

CNViz takes probe, gene, and segment-level log2 copy number ratios and launches a Shiny app to visualize your sample's copy number profile. You can also integrate loss of heterozygosity (LOH) and single nucleotide variant (SNV) data.

package bioconductor-cnviz

(downloads) docker_bioconductor-cnviz

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cnviz

and update with:

conda update bioconductor-cnviz

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cnviz:<tag>

(see bioconductor-cnviz/tags for valid values for <tag>)

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