recipe bioconductor-cnvranger

Summarization and expression/phenotype association of CNV ranges

Homepage

https://bioconductor.org/packages/3.10/bioc/html/CNVRanger.html

License

Artistic-2.0

Recipe

/bioconductor-cnvranger/meta.yaml

The CNVRanger package implements a comprehensive tool suite for CNV analysis. This includes functionality for summarizing individual CNV calls across a population, assessing overlap with functional genomic regions, and association analysis with gene expression and quantitative phenotypes.

package bioconductor-cnvranger

(downloads) docker_bioconductor-cnvranger

Versions

1.2.0-0, 1.0.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cnvranger

and update with:

conda update bioconductor-cnvranger

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cnvranger:<tag>

(see bioconductor-cnvranger/tags for valid values for <tag>)