recipe bioconductor-contibait

Using strand inheritance data from multiple single cells from the organism whose genome is to be assembled, contiBAIT can cluster unbridged contigs together into putative chromosomes, and order the contigs within those chromosomes.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/contiBAIT.html
License:BSD_2_clause + file LICENSE
Recipe:/bioconductor-contibait/meta.yaml
Links:biotools: contibait, doi: 10.1093/bioinformatics/btx281
package bioconductor-contibait

(downloads) docker_bioconductor-contibait

Versions:

1.10.0-0, 1.8.0-0, 1.6.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-contibait

and update with:

conda update bioconductor-contibait

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-contibait:<tag>

(see bioconductor-contibait/tags for valid values for <tag>)