recipe bioconductor-cytoml

Uses platform-specific implemenations of the GatingML2.0 standard to exchange gated cytometry data with other software platforms.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/CytoML.html

License

Artistic-2.0

Recipe

/bioconductor-cytoml/meta.yaml

package bioconductor-cytoml

Versions

1.8.1-0

Depends

• bioconductor-biobase >=2.42.0,<2.43.0

• bioconductor-flowcore >=1.48.0,<1.49.0

• bioconductor-flowutils >=1.46.0,<1.47.0

• bioconductor-flowworkspace >=3.30.0,<3.31.0

• bioconductor-ggcyto >=1.10.0,<1.11.0

• bioconductor-graph >=1.60.0,<1.61.0

• bioconductor-ncdfflow >=2.28.0,<2.29.0

• bioconductor-opencyto >=1.20.0,<1.21.0

• bioconductor-rbgl >=1.58.0,<1.59.0

• bioconductor-rgraphviz >=2.26.0,<2.27.0

• r-base >=3.5.1,<3.5.2.0a0

• r-base64enc

• r-data.table

• r-jsonlite

• r-plyr

• r-xml

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cytoml

and update with:

conda update bioconductor-cytoml

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cytoml:<tag>

(see bioconductor-cytoml/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-cytoml/README.html)