recipe bioconductor-decipher

Tools for curating, analyzing, and manipulating biological sequences

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/DECIPHER.html

License:

GPL-3

Recipe:

/bioconductor-decipher/meta.yaml

Links:

biotools: DECIPHER

A toolset for deciphering and managing biological sequences.

package bioconductor-decipher

Versions:

2.26.0-1,  2.26.0-0,  2.22.0-2,  2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.1-0,  2.18.0-0,  2.16.0-0, 

2.26.0-1,  2.26.0-0,  2.22.0-2,  2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.1-0,  2.18.0-0,  2.16.0-0,  2.14.0-0,  2.12.0-1,  2.10.0-0,  2.8.1-0,  2.6.0-1,  2.6.0-0

Depends:

• bioconductor-biostrings >=2.66.0,<2.67.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-xvector >=0.38.0,<0.39.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-dbi

• r-rsqlite >=1.1

Required By:

• catch_chimera

• bioconductor-synextend

• dadaist2

• bioconductor-assessorfdata

• bioconductor-sangeranalyser

• bioconductor-assessorf

• bioconductor-openprimer

• bioconductor-scifer

• bioconductor-mia

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-decipher

and update with:

conda update bioconductor-decipher

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-decipher:<tag>

(see bioconductor-decipher/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-decipher/README.html)