bioconductor-deseq2

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Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

Home http://bioconductor.org/packages/3.6/bioc/html/DESeq2.html
Versions 1.10.0, 1.10.1, 1.12.4, 1.14.1, 1.16.1, 1.18.0, 1.18.1, 1.8.2
License LGPL (>= 3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-deseq2

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-deseq2

and update with:

conda update bioconductor-deseq2

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-deseq2.