bioconductor-dnabarcodes

downloads

The package offers a function to create DNA barcode sets capable of correcting insertion, deletion, and substitution errors. Existing barcodes can be analysed regarding their minimal, maximal and average distances between barcodes. Finally, reads that start with a (possibly mutated) barcode can be demultiplexed, i.e., assigned to their original reference barcode.

Home http://bioconductor.org/packages/3.7/bioc/html/DNABarcodes.html
Versions 1.10.0, 1.8.0
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-dnabarcodes
Links biotools: dnabarcodes

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-dnabarcodes

and update with:

conda update bioconductor-dnabarcodes

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-dnabarcodes.