recipe bioconductor-dropletutils

Utilities for Handling Single-Cell Droplet Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/DropletUtils.html

License:

GPL-3

Recipe:

/bioconductor-dropletutils/meta.yaml

Links:

biotools: DropletUtils

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

package bioconductor-dropletutils

(downloads) docker_bioconductor-dropletutils

Versions:
1.18.0-11.18.0-01.14.2-11.14.2-01.14.0-01.12.1-01.12.0-01.10.3-01.10.0-0

1.18.0-11.18.0-01.14.2-11.14.2-01.14.0-01.12.1-01.12.0-01.10.3-01.10.0-01.8.0-01.6.1-01.4.2-01.2.1-01.0.3-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-dropletutils

and update with:

conda update bioconductor-dropletutils

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dropletutils:<tag>

(see bioconductor-dropletutils/tags for valid values for <tag>)

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