recipe bioconductor-dss

DSS is an R library performing differntial analysis for count-based sequencing data. It detectes differentially expressed genes (DEGs) from RNA-seq, and differentially methylated loci or regions (DML/DMRs) from bisulfite sequencing (BS-seq). The core of DSS is a new dispersion shrinkage method for estimating the dispersion parameter from Gamma-Poisson or Beta-Binomial distributions.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/DSS.html
License:GPL
Recipe:/bioconductor-dss/meta.yaml
Links:biotools: dss
package bioconductor-dss

(downloads) docker_bioconductor-dss

Versions:

2.30.0-0, 2.28.0-0, 2.26.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-dss

and update with:

conda update bioconductor-dss

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dss:<tag>

(see bioconductor-dss/tags for valid values for <tag>)