-
recipe
bioconductor-ebsea
Exon Based Strategy for Expression Analysis of genes
- Homepage
- License
GPL-2
- Recipe
- Links
biotools: ebsea, doi: 10.1038/nmeth.3252
Calculates differential expression of genes based on exon counts of genes obtained from RNA-seq sequencing data.
-
package
bioconductor-ebsea
¶ -
- Versions
1.18.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-0
- Depends
bioconductor-deseq2
>=1.30.0,<1.31.0
bioconductor-empiricalbrownsmethod
>=1.18.0,<1.19.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-ebsea
and update with:
conda update bioconductor-ebsea
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-ebsea:<tag>
(see bioconductor-ebsea/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-ebsea/README.html)