recipe bioconductor-faahko

Saghatelian et al. (2004) FAAH knockout LC/MS data

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/faahKO.html

License

LGPL

Recipe

/bioconductor-faahko/meta.yaml

Positive ionization mode data in NetCDF file format. Centroided subset from 200-600 m/z and 2500-4500 seconds. Data originally reported in "Assignment of Endogenous Substrates to Enzymes by Global Metabolite Profiling" Biochemistry; 2004; 43(45). Also includes detected peaks in an xcmsSet.

package bioconductor-faahko

Versions

1.28.0-0,  1.26.0-0,  1.24.0-1,  1.22.0-0,  1.18.0-0

Depends

• bioconductor-xcms >=3.10.0,<3.11.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-cosmiq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-faahko

and update with:

conda update bioconductor-faahko

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-faahko:<tag>

(see bioconductor-faahko/tags for valid values for <tag>)

Link to this page

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