bioconductor-ffpe

downloads

Identify low-quality data using metrics developed for expression data derived from Formalin-Fixed, Paraffin-Embedded (FFPE) data. Also a function for making Concordance at the Top plots (CAT-plots).

Home http://bioconductor.org/packages/3.7/bioc/html/ffpe.html
Versions 1.24.0, 1.22.0
License GPL (>2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-ffpe
Links biotools: ffpe

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ffpe

and update with:

conda update bioconductor-ffpe

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-ffpe.