recipe bioconductor-fishpond

Fishpond: downstream methods and tools for expression data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/fishpond.html

License:

GPL-2

Recipe:

/bioconductor-fishpond/meta.yaml

Fishpond contains methods for differential transcript and gene expression analysis of RNA-seq data using inferential replicates for uncertainty of abundance quantification, as generated by Gibbs sampling or bootstrap sampling. Also the package contains a number of utilities for working with Salmon and Alevin quantification files.

package bioconductor-fishpond

(downloads) docker_bioconductor-fishpond

Versions:
2.4.0-02.0.1-12.0.1-02.0.0-01.8.0-01.6.0-11.6.0-01.4.0-01.2.0-0

2.4.0-02.0.1-12.0.1-02.0.0-01.8.0-01.6.0-11.6.0-01.4.0-01.2.0-01.0.1-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-fishpond

and update with:

conda update bioconductor-fishpond

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-fishpond:<tag>

(see bioconductor-fishpond/tags for valid values for <tag>)

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