recipe bioconductor-funchip

Preprocessing and smoothing of ChIP-Seq peaks and efficient implementation of the k-mean alignment algorithm to classify them.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/FunChIP.html

License

Artistic-2.0

Recipe

/bioconductor-funchip/meta.yaml

Links

biotools: funchip, doi: 10.1093/bioinformatics/btx201

package bioconductor-funchip

(downloads) docker_bioconductor-funchip

Versions

1.8.0-0, 1.6.0-0, 1.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-funchip

and update with:

conda update bioconductor-funchip

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-funchip:<tag>

(see bioconductor-funchip/tags for valid values for <tag>)