recipe bioconductor-geneexpressionsignature

Gene Expression Signature based Similarity Metric

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/GeneExpressionSignature.html

License:

GPL-2

Recipe:

/bioconductor-geneexpressionsignature/meta.yaml

This package gives the implementations of the gene expression signature and its distance to each. Gene expression signature is represented as a list of genes whose expression is correlated with a biological state of interest. And its distance is defined using a nonparametric, rank-based pattern-matching strategy based on the Kolmogorov-Smirnov statistic. Gene expression signature and its distance can be used to detect similarities among the signatures of drugs, diseases, and biological states of interest.

package bioconductor-geneexpressionsignature

(downloads) docker_bioconductor-geneexpressionsignature

Versions:

1.44.0-01.40.0-01.38.0-01.34.0-01.32.0-01.30.0-11.28.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-geneexpressionsignature

and update with:

conda update bioconductor-geneexpressionsignature

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-geneexpressionsignature:<tag>

(see bioconductor-geneexpressionsignature/tags for valid values for <tag>)

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